STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13895DNA mismatch repair protein Mlh1. (747 aa)    
Predicted Functional Partners:
N307_05970
Mismatch repair endonuclease PMS2.
  
 
0.999
N307_10262
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.996
N307_10264
DNA mismatch repair protein Msh6; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.995
N307_05631
PMS1 protein 1.
  
 
0.994
N307_11572
DNA mismatch repair protein Mlh3.
    
0.994
N307_03525
Exonuclease 1.
  
 0.989
N307_09613
Uncharacterized protein.
  
 0.984
N307_14164
Fanconi anemia group J protein.
   
 0.977
N307_01393
Regulator of telomere elongation helicase 1.
   
 0.965
N307_10883
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.964
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.