STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08312Protein spinster 3. (489 aa)    
Predicted Functional Partners:
N307_03043
Cytochrome b5 reductase 4.
    
  0.806
N307_13632
Bifunctional epoxide hydrolase 2.
    
 0.600
N307_10662
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.565
N307_07921
Cleavage stimulation factor subunit 3.
    
 0.495
N307_11128
Thymidylate synthase.
    
  0.483
N307_13891
Thioredoxin domain-containing protein 3.
   
 0.478
N307_09149
Major facilitator superfamily domain-containing protein 9.
   
  
 0.467
N307_06657
Major facilitator superfamily domain-containing protein 10.
   
  
 0.451
N307_06616
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
  0.430
N307_10099
Nucleoside diphosphate kinase 5; Belongs to the NDK family.
    
  0.430
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.