STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09343Protein transport protein Sec61 subunit alpha isoform 2. (481 aa)    
Predicted Functional Partners:
N307_01071
Translocation protein SEC63.
   
 
 0.998
N307_00197
60S ribosomal protein L5.
 
 
 0.994
N307_13794
60S ribosomal protein L26.
  
 
 0.993
N307_12366
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.992
N307_07399
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.992
N307_03314
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.992
N307_14687
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.992
N307_00435
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.991
N307_08918
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.991
N307_14525
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.991
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.