STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06213Laminin subunit alpha-2. (880 aa)    
Predicted Functional Partners:
N307_09912
Laminin subunit gamma-1.
 
 
 0.992
N307_09911
Laminin subunit gamma-2.
   
0.918
N307_10160
Laminin subunit beta-1.
   
0.916
N307_06211
Laminin subunit alpha-2.
 
      0.900
N307_14806
Laminin subunit alpha-2.
 
      0.900
N307_00124
Laminin subunit beta-3.
   
0.898
N307_07571
Integrin alpha-6; Belongs to the integrin alpha chain family.
    
 0.838
N307_00808
Integrin alpha-9; Belongs to the integrin alpha chain family.
    
 0.836
N307_11616
Integrin alpha-8; Belongs to the integrin alpha chain family.
    
 0.836
N307_14905
Laminin subunit alpha-1.
  
 
0.825
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.