STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02199Catenin alpha-2. (162 aa)    
Predicted Functional Partners:
N307_02197
Catenin alpha-2.
 
     0.920
N307_01802
Catenin beta-1.
   
 0.881
N307_06061
Vinculin.
    
 0.876
N307_05517
Junction plakoglobin.
   
 0.861
N307_04597
Alpha-actinin-2.
   
 0.828
N307_11135
Talin-2.
   
 0.822
N307_02710
Mesoderm development candidate 1.
   
 0.822
N307_02209
Talin-1.
   
 0.822
N307_14122
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
   
 0.773
N307_15002
Catenin delta-1.
   
 0.773
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.