STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13293Non-structural maintenance of chromosomes element 1. (238 aa)    
Predicted Functional Partners:
N307_11173
E3 SUMO-protein ligase NSE2.
    
 0.999
N307_06002
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
N307_04018
Structural maintenance of chromosomes protein 6.
    
 0.999
N307_11966
PML-RARA-regulated adapter molecule 1.
    
 0.974
N307_02144
Melanoma-associated antigen E1.
    
 0.974
N307_08829
Structural maintenance of chromosomes protein 3.
    
 0.911
N307_02419
Structural maintenance of chromosomes protein 1A.
    
 0.905
N307_13410
Structural maintenance of chromosomes protein 1B.
    
 0.905
N307_10940
Structural maintenance of chromosomes protein 4.
    
 0.895
N307_13168
Small ubiquitin-related modifier.
    
 0.726
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.