STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02739Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (166 aa)    
Predicted Functional Partners:
N307_07868
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
N307_06041
Ribosomal_S10 domain-containing protein.
  
 0.999
N307_02201
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
N307_07138
Uncharacterized protein.
  
 
 0.999
N307_09155
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
N307_09533
Uncharacterized protein.
   
 0.999
N307_02932
Uncharacterized protein.
  
 0.999
N307_12703
Uncharacterized protein.
  
 0.999
N307_02989
Uncharacterized protein.
  
 
 0.999
N307_03079
MRP-S28 domain-containing protein.
   
 0.999
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.