STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02196Acrosin; Belongs to the peptidase S1 family. (234 aa)    
Predicted Functional Partners:
N307_00699
Deleted in malignant brain tumors 1 protein.
 
  
  0.848
N307_04073
Hepatocyte growth factor receptor.
    
 0.846
N307_10461
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.735
N307_00702
Deleted in malignant brain tumors 1 protein.
 
  
  0.714
N307_15243
WD repeat-containing protein 90.
    
 0.682
N307_06246
Ig heavy chain V-III region VH26.
    
  0.642
N307_02424
Lipocln_cytosolic_FA-bd_dom domain-containing protein.
   
 0.642
N307_00499
Chymotrypsin-like protease CTRL-1; Belongs to the peptidase S1 family.
  
0.638
N307_08740
Lysyl oxidase 4.
 
  
  0.621
N307_10710
Trypsin I-P1.
  
  
  0.604
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.