STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13606Gamma-taxilin. (250 aa)    
Predicted Functional Partners:
N307_14656
Alpha-taxilin.
  
 
  
0.692
N307_00168
Syntaxin-3.
    
 0.616
N307_07428
Syntaxin-1A; Belongs to the syntaxin family.
    
 0.616
N307_14146
Syntaxin-2; Belongs to the syntaxin family.
    
 0.616
N307_03743
Syntaxin-11.
    
 0.575
N307_06209
Uncharacterized protein.
    
 0.563
N307_14347
Syntaxin-19.
    
 0.555
N307_12593
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.528
N307_07216
ATP-dependent (S)-NAD(P)H-hydrate dehydratase.
      
 0.442
N307_14609
Trafficking protein particle complex subunit 3.
    
 
 0.440
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.