STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08718Cathepsin E; Belongs to the peptidase A1 family. (373 aa)    
Predicted Functional Partners:
N307_04262
Angiotensinogen; Belongs to the serpin family.
    
 0.896
N307_11192
Cathepsin L1; Belongs to the peptidase C1 family.
   
 0.882
N307_13671
Cathepsin B; Belongs to the peptidase C1 family.
   
 0.880
N307_03821
Cathepsin O; Belongs to the peptidase C1 family.
   
 0.874
N307_02038
Renin receptor.
   
 0.824
N307_13908
Interferon-induced transmembrane protein 10.
 
   
 0.799
N307_09851
Cathepsin Z; Belongs to the peptidase C1 family.
   
 0.795
N307_13907
Cathepsin D; Belongs to the peptidase A1 family.
  
  
0.795
N307_10379
Cathepsin E-A; Belongs to the peptidase A1 family.
  
  
 
0.784
N307_09614
Pro-cathepsin H; Belongs to the peptidase C1 family.
   
 0.759
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.