STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10430Lamin-B receptor. (614 aa)    
Predicted Functional Partners:
N307_01769
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.993
N307_14384
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.989
N307_11175
Squalene monooxygenase.
   
 
 0.960
N307_12415
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.960
N307_05832
Sigma non-opioid intracellular receptor 1.
   
 
 0.953
N307_11706
3-keto-steroid reductase.
   
 
 0.947
N307_11563
Putative ergosterol biosynthetic protein 28.
   
 
 0.943
N307_06141
Cholesterol 25-hydroxylase-like; Belongs to the sterol desaturase family.
   
 0.939
N307_09832
Delta(24)-sterol reductase.
 
 
 0.933
N307_13713
Fatty acid hydroxylase domain-containing protein 2; Belongs to the sterol desaturase family.
   
 0.907
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.