STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10367Nuclear nucleic acid-binding protein C1D. (144 aa)    
Predicted Functional Partners:
N307_01443
Exosome component 10.
   
 0.999
N307_02479
Exosome complex component RRP4.
   
 0.998
N307_15136
Exosome complex component RRP45.
   
 0.998
N307_08753
Exosome complex component CSL4.
   
 0.998
N307_09648
Exosome complex component RRP43.
   
 0.997
N307_00346
M-phase phosphoprotein 6.
   
 0.991
N307_00134
Exosome complex component RRP40.
   
 0.990
N307_08283
Superkiller viralicidic activity 2-like 2.
   
 0.989
N307_11032
Exosome complex component RRP41.
   
 0.989
N307_01797
Exosome complex component RRP42.
   
 0.989
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.