STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06349Condensin-2 complex subunit H2. (98 aa)    
Predicted Functional Partners:
N307_09113
Condensin-2 complex subunit G2.
  
 0.998
N307_10940
Structural maintenance of chromosomes protein 4.
   
 0.987
N307_08829
Structural maintenance of chromosomes protein 3.
   
 0.892
N307_02419
Structural maintenance of chromosomes protein 1A.
   
 0.885
N307_13410
Structural maintenance of chromosomes protein 1B.
   
 0.885
N307_04018
Structural maintenance of chromosomes protein 6.
   
 0.885
N307_01574
Serine/threonine-protein kinase PLK1.
   
  0.694
N307_12475
Retinoblastoma-like 2.
   
 
  0.665
N307_11235
Retinoblastoma-associated protein.
   
 
  0.663
N307_08060
Condensin complex subunit 3.
   
 
 0.656
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.