STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14535Calmodulin; Belongs to the calmodulin family. (138 aa)    
Predicted Functional Partners:
N307_10126
Calcium/calmodulin-dependent protein kinase type II subunit alpha.
   
 0.981
N307_11022
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
    
 0.979
N307_04957
Ras GTPase-activating-like IQGAP2.
    
 0.938
N307_10768
Serine/threonine-protein phosphatase.
 
  
 0.930
N307_00890
Calcium/calmodulin-dependent protein kinase kinase 2.
    
 0.919
N307_07533
Glutamate receptor ionotropic, NMDA 1.
    
 0.911
N307_02203
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.903
N307_14520
Calcium/calmodulin-dependent protein kinase type IV.
   
 0.902
N307_00125
Calcium/calmodulin-dependent protein kinase type 1G.
   
 0.898
N307_10364
Calcineurin subunit B type 1.
   
0.897
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.