STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00318Dynein light chain roadblock-type 2. (68 aa)    
Predicted Functional Partners:
N307_08900
Cytoplasmic dynein 1 intermediate chain 1.
   
 0.981
N307_02030
Dynein light chain Tctex-type 3.
   
 0.945
N307_13450
Dynein light chain Tctex-type 1.
   
 0.944
N307_14460
Cytoplasmic dynein 2 light intermediate chain 1.
    
 0.933
N307_02446
WD repeat-containing protein 34.
    
 0.880
N307_09110
WD repeat-containing protein 60.
    
 0.870
N307_05101
Dynein light chain.
   
 0.867
N307_12103
Dynein light chain.
   
 0.865
N307_00976
Dynein light chain.
   
 0.865
N307_12393
Dynein light chain.
   
 0.865
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.