STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13446Radial spoke head protein 3. (301 aa)    
Predicted Functional Partners:
N307_00145
N-acylneuraminate-9-phosphatase.
   
 
 0.948
N307_03947
Inhibitor of growth protein.
    
   0.947
N307_03739
Pre-mRNA-splicing regulator WTAP.
    
   0.947
N307_10755
Radial spoke head protein 4 A.
  
 
 0.914
N307_02300
Dystrobrevin alpha.
    
   0.889
N307_04061
Dystrobrevin beta.
    
   0.889
N307_11340
Radial spoke head protein 9.
  
 
 0.877
N307_09648
Exosome complex component RRP43.
    
   0.813
N307_10150
cAMP-dependent protein kinase type II-beta regulatory subunit.
   
 0.781
N307_14254
cAMP-dependent protein kinase type I-beta regulatory subunit.
   
 0.781
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.