STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04991Unconventional myosin-Vb. (41 aa)    
Predicted Functional Partners:
N307_11960
Ras-related protein Rab-11B.
   
 0.800
N307_02680
Ras-related protein Rab-11A.
   
 0.800
N307_05309
Ras-related protein Rab-11A.
   
 0.800
N307_13856
Rab11 family-interacting protein 2.
   
 0.721
N307_14535
Calmodulin; Belongs to the calmodulin family.
    
 0.718
N307_08445
Calmodulin; Belongs to the calmodulin family.
    
 0.718
N307_00442
Rab-like 2A.
   
 0.690
N307_09310
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.683
N307_09607
Protein unc-45 A.
    
 
 0.623
N307_03629
Protein spire 2.
   
 0.601
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.