STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09464Melanopsin-A. (342 aa)    
Predicted Functional Partners:
N307_06876
Arrestin-C.
   
 0.743
N307_08173
S-arrestin.
   
 0.743
N307_14489
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.699
N307_08382
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.699
N307_07660
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.
    
  0.687
N307_15084
Serine/threonine-protein phosphatase.
    
 0.668
N307_08889
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.
   
 0.655
N307_00364
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.647
N307_08613
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5.
    
  0.636
N307_12279
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10.
    
  0.634
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (16%) [HD]