STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02837NSFL1 cofactor p47. (340 aa)    
Predicted Functional Partners:
N307_05839
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.999
N307_08412
UBX domain-containing protein 6.
    
 0.994
N307_03000
UBX domain-containing protein 2A.
  
 
 
0.991
N307_13079
Tether containing UBX domain for GLUT4.
    
 0.980
N307_10881
FAS-associated factor 1.
    
 0.977
N307_01891
Deubiquitinating protein VCIP135.
    
 
 0.973
N307_14112
Ubiquitin fusion degradation protein 1.
   
 
 0.969
N307_05702
UBX domain-containing protein 7.
    
 
 0.968
N307_11137
Uncharacterized protein.
    
  0.949
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.948
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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