STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04730Protein SZT2. (161 aa)    
Predicted Functional Partners:
N307_08932
Integrin-alpha FG-GAP repeat-containing protein 2.
    
 0.990
N307_15336
UPF0536 protein C12orf66.
    
 0.990
N307_14083
DEP domain-containing protein 5.
    
 0.984
N307_12375
WD repeat-containing protein 59.
    
 0.983
N307_01606
WD repeat-containing protein 24.
    
 0.981
N307_07809
Nitrogen permease regulator 2-like.
    
 0.981
N307_13593
Nitrogen permease regulator 3-like.
    
 0.981
N307_07232
Lysosome-associated membrane glycoprotein 1.
    
   0.947
N307_04731
Protein SZT2.
 
     0.923
N307_08921
DNA repair protein XRCC4.
    
 0.907
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.