STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10814KN motif and ankyrin repeat domain-containing protein 1. (617 aa)    
Predicted Functional Partners:
N307_10816
KN motif and ankyrin repeat domain-containing protein 1.
 
      0.900
N307_06879
Chromosome-associated kinesin KIF4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.709
N307_15243
WD repeat-containing protein 90.
    
 0.571
N307_04064
Ankyrin repeat domain-containing protein 7.
  
 
  0.561
N307_05277
Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.
   
  0.560
N307_00139
Baculoviral IAP repeat-containing protein 6.
    
 0.558
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.542
N307_05702
UBX domain-containing protein 7.
    
  0.542
N307_00888
Intraflagellar transport protein 81.
    
 0.534
N307_06856
Rab-like 5.
    
  0.531
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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