STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12273Hydroxysteroid dehydrogenase-like 2. (401 aa)    
Predicted Functional Partners:
N307_10693
Peroxisomal targeting signal 1 receptor.
   
 0.991
N307_05292
PEX5-related protein.
   
 0.991
N307_06199
Protein FAM185A.
    
 0.972
N307_01451
Peroxisomal membrane protein PEX14.
    
 0.972
N307_06493
Serine protease HTRA3.
   
 0.972
N307_06006
Serine protease HTRA1.
   
 0.972
N307_06548
Peroxisome biogenesis factor 10.
     
 0.970
N307_02227
Ubiquitin-40S ribosomal protein S27a.
    
 0.970
N307_03488
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.963
N307_04801
ACB domain-containing protein.
  
 0.962
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.