STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09836Acyl-coenzyme A thioesterase 11. (299 aa)    
Predicted Functional Partners:
N307_08914
Acyl-coenzyme A thioesterase 12.
 
      0.899
N307_03738
Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.769
N307_00599
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.769
N307_14206
Succinate-CoA ligase subunit beta.
  
 
 0.765
N307_11230
Succinate-CoA ligase subunit beta.
    
 0.762
N307_03109
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
  0.752
N307_04706
4-trimethylaminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.752
N307_00927
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.752
N307_13353
Alpha-aminoadipic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.750
N307_12968
CoA_binding domain-containing protein; Belongs to the succinate/malate CoA ligase alpha subunit family.
    
  0.745
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.