STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06836ZZ-type zinc finger-containing protein 3. (918 aa)    
Predicted Functional Partners:
N307_05702
UBX domain-containing protein 7.
   
 
  0.966
N307_09940
Transcriptional adapter 3.
    
 0.965
N307_12398
Transcriptional adapter.
    
 0.941
N307_11794
MAP3K12-binding inhibitory protein 1.
    
 0.885
N307_04190
DnaJ subfamily C member 10.
   
 0.876
N307_05528
Histone acetyltransferase KAT2B.
    
 0.856
N307_06342
Histone acetyltransferase KAT2B.
    
 0.856
N307_04833
WD repeat-containing protein 5.
    
 0.796
N307_00203
Protein Dr1.
    
 0.786
N307_03253
COMM domain-containing protein 2.
    
 0.775
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.