STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13609Nance-Horan syndrome protein. (1423 aa)    
Predicted Functional Partners:
N307_12345
Nck-associated protein 1.
    
  0.659
N307_07581
E3 ubiquitin-protein ligase MIB1.
   
 0.631
N307_09821
Histone H2A deubiquitinase MYSM1.
    
 0.628
N307_10461
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.620
N307_09093
Abl interactor 1.
    
  0.618
N307_08437
Thyroid receptor-interacting protein 11.
   
 0.618
N307_04179
Abl interactor 2.
    
  0.615
N307_00770
Cell division control protein 42.
    
  0.614
N307_09104
MAGUK p55 subfamily member 7.
    
  0.612
N307_15030
MAGUK p55 subfamily member 3.
    
  0.612
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.