STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08703Retinoblastoma-binding protein 5. (523 aa)    
Predicted Functional Partners:
N307_07619
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.999
N307_07472
Protein dpy-30.
    
 0.997
N307_04833
WD repeat-containing protein 5.
   
0.993
N307_02051
Lysine-specific demethylase 6A.
    
 0.987
N307_00899
Histone-lysine N-methyltransferase SETD1B.
    
 0.984
N307_12650
Death-inducer obliterator 1.
    
 
 0.983
N307_05686
Histone-lysine N-methyltransferase SETD1A.
    
 0.976
N307_02227
Ubiquitin-40S ribosomal protein S27a.
    
  0.976
N307_06370
Histone-lysine N-methyltransferase 2C.
    
 0.968
N307_06369
Histone-lysine N-methyltransferase 2C.
    
 0.968
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.