STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01376Acid-sensing ion channel 1; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (364 aa)    
Predicted Functional Partners:
N307_00507
Stomatin-like 1.
    
 0.635
N307_04347
Acid-sensing ion channel 4; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
  
  
0.599
N307_04874
Erythrocyte band 7 integral membrane protein.
    
 0.531
N307_12821
Stomatin-like 3.
    
 0.531
N307_06507
E3 ubiquitin-protein ligase NEDD4.
    
 0.522
N307_08546
E3 ubiquitin-protein ligase HECW2.
    
 0.522
N307_01724
E3 ubiquitin-protein ligase HECW1.
    
 0.522
N307_02410
E3 ubiquitin-protein ligase NEDD4-like.
    
 0.522
N307_04677
Podocin.
    
 0.507
N307_04638
NEDD4-like E3 ubiquitin-protein ligase WWP1.
    
  0.466
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.