STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14940CCAAT/enhancer-binding protein gamma. (122 aa)    
Predicted Functional Partners:
N307_05092
Cyclic AMP-dependent transcription factor ATF-4.
   
 0.965
N307_15382
Uncharacterized protein.
   
 0.892
N307_04615
Cytochrome c oxidase assembly factor 6.
   
 0.873
N307_03670
Uncharacterized protein.
   
 0.860
N307_04264
Uncharacterized protein C1orf198.
   
 0.830
N307_04997
Uncharacterized protein.
   
 0.830
N307_00979
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.829
N307_06481
Uncharacterized protein.
   
 0.817
N307_04562
Single-stranded DNA cytosine deaminase.
   
 0.767
N307_14408
Cytochrome b-c1 complex subunit 7.
   
 0.730
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.