STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05030Retinoic acid-induced protein 3. (357 aa)    
Predicted Functional Partners:
N307_01754
CKLF-like MARVEL transmembrane domain-containing protein 8.
      
 0.518
N307_04942
Neurotensin/neuromedin N.
    
  0.484
N307_03570
HAUS augmin-like complex subunit 8.
    
  0.479
N307_13645
Prepronociceptin.
    
  0.478
N307_06876
Arrestin-C.
    
 0.463
N307_08173
S-arrestin.
    
 0.463
N307_03504
HAUS augmin-like complex subunit 3.
    
 0.463
N307_11394
Putative G-protein coupled receptor 156.
     
 0.435
N307_10461
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.424
N307_12927
Platelet endothelial cell adhesion molecule.
  
 
  0.419
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.