STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05601Transcriptional regulator Erg. (475 aa)    
Predicted Functional Partners:
N307_03712
Runt-related transcription factor.
   
 0.720
N307_14708
Runt-related transcription factor 3.
   
 0.720
N307_05673
Core-binding factor subunit beta.
    
  0.677
N307_10462
MADS-box domain-containing protein.
    
 0.615
N307_01625
Transcription factor PU.1.
   
 0.609
N307_06093
Paired box protein Pax-2.
    
 
 0.591
N307_10867
T-cell acute lymphocytic leukemia protein 1.
    
 0.580
N307_09666
ETS homologous factor.
    
0.562
N307_03068
Transcription factor ETV6.
    
0.562
N307_01165
GATA-binding factor 2.
    
 0.551
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.