STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09966MaoC-like domain-containing protein. (160 aa)    
Predicted Functional Partners:
N307_02825
3-ketoacyl-CoA thiolase B, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.994
N307_09033
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.985
N307_09970
Peroxisomal acyl-coenzyme A oxidase 2.
  
 0.974
N307_12273
Hydroxysteroid dehydrogenase-like 2.
  
 0.959
N307_12272
Hydroxysteroid dehydrogenase-like 2.
  
 0.959
N307_13535
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.953
N307_06494
Peroxisomal acyl-coenzyme A oxidase 3.
  
 0.951
N307_02462
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 0.915
N307_09479
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 0.915
N307_05635
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.907
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.