STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03987Polypeptide N-acetylgalactosaminyltransferase. (445 aa)    
Predicted Functional Partners:
N307_08993
C1GALT1-specific chaperone 1.
     
 0.885
N307_10982
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.861
N307_07890
Hexosyltransferase.
   
 0.804
N307_09869
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7.
     
 0.618
N307_14803
Uncharacterized protein.
    
 0.615
N307_06982
Polypeptide N-acetylgalactosaminyltransferase.
  
0.611
N307_09520
Mucin-1.
   
 0.598
N307_04949
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.559
N307_10718
Protein bicaudal D 1.
   
 
  0.492
N307_15105
Dynactin subunit 6.
 
   
  0.489
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.