STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12210PfkB domain-containing protein. (525 aa)    
Predicted Functional Partners:
N307_10202
Uracil phosphoribosyltransferase.
    
  0.857
N307_03192
Purine nucleoside phosphorylase.
  
 
  0.857
N307_10946
Dihydropyrimidine dehydrogenase [NADP(+)].
  
 
  0.849
N307_06348
Thymidine phosphorylase.
    
  0.848
N307_03176
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
    
  0.839
N307_13970
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
    
  0.839
N307_09213
4Fe-4S ferredoxin-type domain-containing protein.
    
  0.833
N307_13438
tRNA-specific adenosine deaminase 2.
    
  0.833
N307_06059
Adenosine kinase.
  
 
 0.828
N307_09773
Lysophospholipid acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
  
 
 0.828
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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