STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09890Activity-dependent neuroprotector homeobox protein. (1078 aa)    
Predicted Functional Partners:
N307_09446
Chromobox protein 3.
    
 
 0.699
N307_09889
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
 
      0.681
N307_06571
Chromodomain-helicase-DNA-binding protein 5.
   
 
 0.676
N307_10665
Chromodomain-helicase-DNA-binding protein 4.
   
 
 0.676
N307_12919
Nucleosome-remodeling factor subunit BPTF.
   
  
 0.666
N307_08153
E3 ubiquitin-protein ligase TRIP12.
   
  
 0.634
N307_12120
Chromobox protein 1.
    
 
 0.602
N307_14078
Eukaryotic translation initiation factor 4E transporter.
  
 
 0.538
N307_09532
Histone-lysine N-methyltransferase ASH1L.
   
 
 0.515
N307_06471
M-phase phosphoprotein 8.
    
 
 0.511
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.