STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07322Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family. (792 aa)    
Predicted Functional Partners:
N307_05710
Transient receptor potential cation channel subfamily M member 2.
     
0.863
N307_08608
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.793
N307_07324
Sedoheptulokinase.
 
    
 0.779
N307_13249
Protein kinase C beta type.
    
 0.763
N307_09512
Transient receptor potential cation channel subfamily M member 8.
   
 
 0.691
N307_14535
Calmodulin; Belongs to the calmodulin family.
    
 
 0.682
N307_08445
Calmodulin; Belongs to the calmodulin family.
    
 
 0.682
N307_06336
Transient receptor potential cation channel subfamily A member 1.
     
0.675
N307_06095
Hypoxia-inducible factor 1-alpha inhibitor.
    
   0.655
N307_11127
Tyrosine-protein kinase.
    
 0.631
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.