STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10231Neuronal PAS domain-containing protein 3. (82 aa)    
Predicted Functional Partners:
N307_05702
UBX domain-containing protein 7.
    
 0.975
N307_02715
Aryl hydrocarbon receptor nuclear translocator 2.
    
 0.946
N307_10230
Neuronal PAS domain-containing protein 3.
 
      0.900
N307_03439
Egl nine 1.
    
 0.849
N307_10229
Egl nine 3.
    
 0.849
N307_13681
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.826
N307_09132
Neuronal PAS domain-containing protein 2.
    
 0.741
N307_07105
Circadian locomoter output cycles protein kaput.
    
 0.741
N307_08965
Neuronal PAS domain-containing protein 2.
    
 0.741
N307_06401
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.740
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.