STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14796Protein unc-50. (259 aa)    
Predicted Functional Partners:
N307_14798
Type I inositol 3,4-bisphosphate 4-phosphatase.
 
      0.585
N307_13505
Protein RIC-3.
      
 0.574
N307_06087
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 
 0.554
N307_14859
Protein disulfide-isomerase TMX3.
      
 0.542
N307_00301
Mannosyltransferase.
      
 0.515
N307_09055
UDP-N-acetylglucosamine transporter.
   
  
 0.513
N307_01652
Rho GTPase-activating protein 6.
      
 0.507
N307_09161
UDP-glucuronic acid decarboxylase 1.
      
 0.501
N307_14220
Transmembrane protein with metallophosphoesterase domain.
      
 0.457
N307_07425
Golgi SNAP receptor complex member 1.
   
  
 0.439
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.