STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01347Keratin. (58 aa)    
Predicted Functional Partners:
N307_02992
Intersectin-2.
   
  0.875
N307_06256
U3 small nucleolar RNA-associated protein 14 A.
   
 0.818
N307_14096
Small nuclear ribonucleoprotein Sm D3.
   
 0.783
N307_09798
Small nuclear ribonucleoprotein F.
   
 0.776
N307_15080
Something about silencing protein 10.
   
 0.774
N307_09733
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.772
N307_15292
Small nuclear ribonucleoprotein G.
   
  0.771
N307_14324
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
    
 0.767
N307_13822
Pre-mRNA-splicing factor SLU7.
    
 0.766
N307_03876
WD repeat-containing protein 25.
    
 0.763
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.