STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12475Retinoblastoma-like 2. (1097 aa)    
Predicted Functional Partners:
N307_00502
Transcription factor E2F4.
   
 0.994
N307_04610
AT-rich interactive domain-containing protein 4B.
   
 
 0.993
N307_08484
AT-rich interactive domain-containing protein 4A.
   
 
 0.993
N307_09772
Transcription factor E2F3.
   
 0.993
N307_07239
Transcription factor Dp-1.
   
 0.983
N307_08146
Transcription factor Dp-2.
   
 0.983
N307_11589
Protein lin-52.
    
 0.978
N307_14414
G1/S-specific cyclin-E2; Belongs to the cyclin family.
   
 0.962
N307_12944
G1/S-specific cyclin-E1; Belongs to the cyclin family.
   
 0.962
N307_15023
G1/S-specific cyclin-D1; Belongs to the cyclin family.
    
 0.956
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.