STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12989Otoconin-90. (484 aa)    
Predicted Functional Partners:
N307_07899
Phospholipase A2.
     
 0.862
N307_09894
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.855
N307_11629
HERV-H LTR-associating protein 1.
 
    
 0.843
N307_14537
Phospholipase B1, membrane-associated.
     
 0.617
N307_05115
85/88 kDa calcium-independent phospholipase A2.
   
 
 0.604
N307_10580
Patatin-like phospholipase domain-containing protein 7.
     
 0.573
N307_08654
Otopetrin-1.
      
 0.568
N307_01979
LIM zinc-binding domain-containing Nebulette.
      
 0.516
N307_05658
Group XV phospholipase A2.
     
 0.410
N307_00506
Uncharacterized protein.
     
 0.410
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.