STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05235Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta. (141 aa)    
Predicted Functional Partners:
N307_08791
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.959
N307_02033
X-linked retinitis pigmentosa GTPase regulator.
    
 
 0.949
N307_04848
72 kDa inositol polyphosphate 5-phosphatase.
    
 0.941
N307_13777
ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.895
N307_06160
Phosphodiesterase.
    
 0.890
N307_03818
Guanylate cyclase soluble subunit beta-1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.870
N307_02533
Guanylate cyclase soluble subunit beta-2; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.870
N307_05574
Phosphodiesterase.
    
 0.866
N307_12355
Phosphodiesterase.
    
 0.859
N307_03817
Guanylate cyclase soluble subunit alpha-3; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.856
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.