STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04798Chromodomain Y-like. (537 aa)    
Predicted Functional Partners:
N307_08424
Histone-lysine N-methyltransferase SETMAR.
   
 0.971
N307_09359
Histone-lysine N-methyltransferase SUV39H2.
   
 0.971
N307_12273
Hydroxysteroid dehydrogenase-like 2.
  
 0.932
N307_12272
Hydroxysteroid dehydrogenase-like 2.
  
 0.932
N307_09033
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.925
N307_10783
Mesoderm induction early response protein 1.
   
 
 0.851
N307_02825
3-ketoacyl-CoA thiolase B, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.848
N307_05789
Thiolase_N domain-containing protein.
  
 0.832
N307_13454
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.829
N307_03738
Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.829
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.