STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04815Interferon regulatory factor 4. (446 aa)    
Predicted Functional Partners:
N307_01890
Serine/threonine-protein kinase Sgk3; Belongs to the protein kinase superfamily.
    
 0.678
N307_02793
Interferon regulatory factor.
   
0.664
N307_13277
CREB-binding protein.
    
 0.615
N307_14813
Centromere protein P.
    
 0.605
N307_03549
Stimulator of interferon genes protein.
   
 0.601
N307_09782
Deacetylase sirtuin-type domain-containing protein.
    
 0.582
N307_11469
NAD-dependent protein deacetylase sirtuin-1.
    
 0.582
N307_02827
Myeloid differentiation primary response protein MyD88.
   
 0.579
N307_07442
C-C motif chemokine.
   
 
  0.573
N307_01625
Transcription factor PU.1.
   
 
 0.562
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.