STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02732Retinaldehyde-binding protein 1. (312 aa)    
Predicted Functional Partners:
N307_07546
Retinol dehydrogenase 3.
    
 0.734
N307_01921
Epidermal retinol dehydrogenase 2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.668
N307_01420
Short-chain dehydrogenase/reductase 3.
    
 0.668
N307_03955
Estradiol 17-beta-dehydrogenase 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.668
N307_00202
Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.642
N307_04521
Dehydrogenase/reductase SDR family member on chromosome X.
    
 0.625
N307_04013
Retinol dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.625
N307_14394
Dehydrogenase/reductase SDR family member 12.
    
 0.625
N307_05872
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.574
N307_00298
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.574
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.