STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06456Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
N307_15049
Uncharacterized protein.
    
   0.939
N307_06918
Ribosomal_L30 domain-containing protein.
   
   0.932
N307_10579
Uncharacterized protein.
   
 
 0.929
N307_05295
Uncharacterized protein.
   
   0.929
N307_01939
Uncharacterized protein.
    
   0.929
N307_01584
Uncharacterized protein.
    
   0.926
N307_00672
Uncharacterized protein.
    
   0.926
N307_10516
Uncharacterized protein.
    
   0.926
N307_08782
L51_S25_CI-B8 domain-containing protein.
   
 
 0.923
N307_02280
Ribosomal_L18e/L15P domain-containing protein.
    
   0.922
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.