STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08690Uncharacterized protein. (735 aa)    
Predicted Functional Partners:
N307_07646
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.682
N307_02251
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.677
N307_02041
60S ribosomal protein L8.
    
 
 0.675
N307_08327
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.667
N307_03314
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.665
N307_13716
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.664
N307_13516
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.662
RPSA
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.
   
   0.660
N307_00435
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
    
   0.658
N307_12366
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
   0.658
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.