STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11367Oxysterol-binding protein; Belongs to the OSBP family. (676 aa)    
Predicted Functional Partners:
N307_07344
Protein NipSnap 2.
   
  0.628
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.622
N307_14691
UDP-glucose 4-epimerase.
     
 0.602
N307_06691
Rho-related GTP-binding protein RhoH.
    
  0.599
N307_09161
UDP-glucuronic acid decarboxylase 1.
     
 0.585
N307_01163
Ras-related protein Rab-7a.
    
  0.570
N307_12762
Rho-related GTP-binding protein RhoJ.
    
  0.555
N307_10639
Rho-related GTP-binding protein RhoQ.
    
  0.555
N307_05517
Junction plakoglobin.
    
  0.546
N307_05220
Transferrin receptor protein 1.
   
 
  0.540
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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