STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_02350Microtubule-associated tumor suppressor candidate 2. (102 aa)    
Predicted Functional Partners:
N307_02349
Microtubule-associated tumor suppressor candidate 2.
 
      0.900
N307_01442
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.725
N307_01635
Cytoskeleton-associated protein 5.
    
 
 0.722
N307_02869
Microtubule-associated protein RP/EB family member 1.
    
 
 0.716
N307_02299
Microtubule-associated protein RP/EB family member 2.
    
 
 0.716
N307_05798
Microtubule-associated protein RP/EB family member 3.
    
 
 0.716
N307_14016
Dynactin subunit 1.
    
 
 0.678
N307_14015
Dynactin subunit 1.
    
 
 0.678
N307_06016
Mitotic checkpoint protein BUB3.
    
 0.676
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 
 0.672
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.