STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05361Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (602 aa)    
Predicted Functional Partners:
N307_11568
Transmembrane protein Tmp21.
   
  
 0.857
N307_00461
Uncharacterized protein C10orf107.
   
    0.641
N307_07897
Vacuolar protein sorting-associated protein 54.
      
 0.566
N307_10510
Serine palmitoyltransferase 1.
   
  
 0.554
N307_05998
Phosphatidate phosphatase PPAPDC1A.
    
   0.532
N307_07614
Phosphatidate phosphatase PPAPDC1B.
    
   0.532
N307_07896
UTP--glucose-1-phosphate uridylyltransferase.
   
  
 0.520
N307_05033
Uncharacterized protein KIAA1467.
      
 0.513
N307_13498
Transmembrane protein 9B.
      
 0.509
N307_12379
Golgi apparatus protein 1.
   
  
 0.419
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.