STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12415Methylsterol monooxygenase 1; Belongs to the sterol desaturase family. (294 aa)    
Predicted Functional Partners:
N307_14384
Lathosterol oxidase; Belongs to the sterol desaturase family.
  
0.989
N307_01769
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
  
 0.985
N307_05613
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating; Belongs to the 3-beta-HSD family.
  
 0.983
N307_11706
3-keto-steroid reductase.
   
 0.982
N307_11175
Squalene monooxygenase.
   
 0.980
N307_01901
25-hydroxycholesterol 7-alpha-hydroxylase.
  
 0.971
N307_01916
Cholesterol 7-alpha-monooxygenase; Belongs to the cytochrome P450 family.
  
 0.969
N307_09832
Delta(24)-sterol reductase.
  
 
 0.963
N307_10430
Lamin-B receptor.
   
 0.960
N307_05832
Sigma non-opioid intracellular receptor 1.
   
 0.954
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.